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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919612.1_cds_XP_016468817.1_61418
CDS Infomation

[gene=LOC107791291] [db_xref=GeneID:107791291] [protein=LOW QUALITY PROTEIN: amino acid permease 6-like] [transl_except=(pos:769..771,aa:Other),(pos:784..786,aa:Other),(pos:793..795,aa:Other)] [protein_id=XP_016468817.1] [location=complement(join(7005..7439,7745..8057,9622..9644,9754..9788,10057..10271,10371..10464,10974..11207,11305..11422))] [gbkey=CDS]
Sequence

ATGGCAGAATTTCAAAAGAACAGCAATATGTACGTAGAACATTCAGCACAAGTAGGAGTA
CTAGAAAGCGGAGAAGTTCATAAAAACATTGACGATGATGGGCGTGAGAAAAGAACTGGT
ACGGTGCTAACAGCGAGTGCACATATAATAACTGCTGTGATAGGGTCAGGGGTGCTATCT
CTAGCATGGGCAATGGCTCAGTTAGGGTGGGTCGCTGGTCCTGTTATTCTCTTTATCTTC
TCTTTCATCACTTACTTCACTTCAACACTTCTCGCCGATTGTTATCGCTCTCCTGGCCCT
ATCTCTGGCAAGAGAAACTACAGTTACATGGAGGTTGTGCGCTCTCACTTAGGAGGTATT
AAGGTGCAACTGTGTGGAATAGCCCAGTATGGTAACCTCGTAGGAATTACCATTGGATAC
ACTATTACTGCATCTATCAGTATGGTGGCAGTAGTAAGGTCAAACTGTTTCCACAAAAAG
GGGCACGAAGCCAGCTGCTCAGTATCAAATTACCCATATATGATTATCTTTGCAGTTATA
CAAATAGTTCTTAGCCAAATACCAAACTTCCATAAGCTTTCATGGCTATCCATTCTTGCT
GCAGTCATGTCTTTTGCTTACTCTCTTATTGGTCTTGGACTTTCCATTGCCAAAGTCGCA
GGTGCAGGGCACCATGTAAAGACAAGCCTAACAGGGATCATGTTAGGTGCTTCTTTAGAA
GATTTGAGAAATTGGGGTCTTTTCTGGGACATGATTGTGCAATATATGTGAGAACTAATT
GCTTAATCAACTTGACAATTTCAGGATACATTGAGATCACCACCTGCAGAGAACAAGGTT
ATGAAGAAAGCATCACTTGTCGGAGTTTTTACCACAACCTTATTCTATGTACTATGTGGT
ACCATTGGCTATGCAGCCTTTGGAAACGATGCACCTGGAAATTTCCTCACTGGATTTGGT
TTCTACGAACCCTTTTGGCTAATTGACTTCGCTAACATTTGCATCGCTATTCACCTGGTT
GGAGCTTACCAGGTTTTCTGCCAACCAATATATGGCTTTGTGGAGGGTCGTTGTAGTGAA
CGATGGCCAGACAACAAATTCATCACTTCCCAACATGCGATAAACATTCCATGTTCTGGT
CATGTTTACTATGTAAATTTTTTCAGGTTGCTGTGGAGGACAGCATATGTTATAGTAACA
GCAGTAATTGCCATGATATTTCCATTCTTCAATCACTTTTTGGGTTTAATTGGGGCAGCT
TCTTTTTATCCATTAACTGTCTACTTGCCAATAGAAATGCACATTGCTCAGAGGAAAATT
CCAAAGTATTCATTCACTTGGATATGGCTGCAAATATTAAGCTGGGGTTGCTTAATTGTG
TCACTTGTTGCAGCAGCTGGATCCATACAGGGTCTTTCTCAAGATCTCAAGACATACAAG
CCTTTCAAATCTCAGGCTCATGAATGA

Peptide Sequence

PEP ID

XP_016468817.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: amino acid permease 6-like [Nicotiana tabacum]
Sequence

MAEFQKNSNMYVEHSAQVGVLESGEVHKNIDDDGREKRTGTVLTASAHIITAVIGSGVLS
LAWAMAQLGWVAGPVILFIFSFITYFTSTLLADCYRSPGPISGKRNYSYMEVVRSHLGGI
KVQLCGIAQYGNLVGITIGYTITASISMVAVVRSNCFHKKGHEASCSVSNYPYMIIFAVI
QIVLSQIPNFHKLSWLSILAAVMSFAYSLIGLGLSIAKVAGAGHHVKTSLTGIMLGASLE
DLRNWGLFWDMIVQYMXELIAXSTXQFQDTLRSPPAENKVMKKASLVGVFTTTLFYVLCG
TIGYAAFGNDAPGNFLTGFGFYEPFWLIDFANICIAIHLVGAYQVFCQPIYGFVEGRCSE
RWPDNKFITSQHAINIPCSGHVYYVNFFRLLWRTAYVIVTAVIAMIFPFFNHFLGLIGAA
SFYPLTVYLPIEMHIAQRKIPKYSFTWIWLQILSWGCLIVSLVAAAGSIQGLSQDLKTYK
PFKSQAHE

Transcript Sequence

Gene sequence data has not been registered.